BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027F03SP1|AL428753
(870 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1293 1725 0.0
>3x_Contig1293
Length = 6455
Score = 1725 bits (870), Expect = 0.0
Identities = 870/870 (100%)
Strand = Plus / Plus
Query: 1 gatcccaacgtattgacattctgtcaaccccttgatgaaccaaactaacgctaacttatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gatcccaacgtattgacattctgtcaaccccttgatgaaccaaactaacgctaacttatc 376
Query: 61 catgaattcgtcctgatcgagtttttccattatttttcgggacttgtctttgacagaggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 catgaattcgtcctgatcgagtttttccattatttttcgggacttgtctttgacagaggt 436
Query: 121 tttcacctcatctcctgcaagaacagattttaataggtcataaatctctgattttggtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tttcacctcatctcctgcaagaacagattttaataggtcataaatctctgattttggtaa 496
Query: 181 ggattctttgaaggcaacgaagaaatcatacacattgatgaaagagcgggcttcacgata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggattctttgaaggcaacgaagaaatcatacacattgatgaaagagcgggcttcacgata 556
Query: 241 aagagtgaatacttgacatataatagggtctattaattcgttgagttttctgtccagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aagagtgaatacttgacatataatagggtctattaattcgttgagttttctgtccagttc 616
Query: 301 acgtatctcatcgtcattgttcgccatacgctggatgactttactcctcggcaagattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 acgtatctcatcgtcattgttcgccatacgctggatgactttactcctcggcaagattct 676
Query: 361 ttccgagtttaacagattgtcttccaaattagtcctgaagaatgggaaaagtccttggga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 ttccgagtttaacagattgtcttccaaattagtcctgaagaatgggaaaagtccttggga 736
Query: 421 taacagtccgttattgttgtccaacgtgaatagctcttgaaaaacgatttgtacgttttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 taacagtccgttattgttgtccaacgtgaatagctcttgaaaaacgatttgtacgttttc 796
Query: 481 gaaatcgaattcttggcgaaatttgtcgcatgcttcccatttactcaaataatcgactaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gaaatcgaattcttggcgaaatttgtcgcatgcttcccatttactcaaataatcgactaa 856
Query: 541 tctgttgttcaacatgtggtaatacaaatcaatcaaattgtaatcgtaaatattgagttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 857 tctgttgttcaacatgtggtaatacaaatcaatcaaattgtaatcgtaaatattgagttt 916
Query: 601 attctccaaaatgttaacgatttgatgtaatttgtcattgatggggttttctgccactag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 917 attctccaaaatgttaacgatttgatgtaatttgtcattgatggggttttctgccactag 976
Query: 661 gaagtccacgaaaaattgttccaacgtatcattttcattgttgagcaatgatacaatttc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 977 gaagtccacgaaaaattgttccaacgtatcattttcattgttgagcaatgatacaatttc 1036
Query: 721 ttcccttggagcccttgagttcaccatagtttctacaaagttcaaaaaggtttggcattt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1037 ttcccttggagcccttgagttcaccatagtttctacaaagttcaaaaaggtttggcattt 1096
Query: 781 agtgagtctatccagatatttctcatctaggaaattaatgttggcaacgtcaatgaatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1097 agtgagtctatccagatatttctcatctaggaaattaatgttggcaacgtcaatgaatat 1156
Query: 841 cgaatacggattattgaaaaaataagacat 870
||||||||||||||||||||||||||||||
Sbjct: 1157 cgaatacggattattgaaaaaataagacat 1186
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7327
Number of Sequences: 1807
Number of extensions: 7327
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 870
length of database: 10,358,551
effective HSP length: 16
effective length of query: 854
effective length of database: 10,329,639
effective search space: 8821511706
effective search space used: 8821511706
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)